Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943728.1_cds_XP_016486753.1_77562
CDS Infomation

[gene=LOC107806993] [db_xref=GeneID:107806993] [protein=pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like] [protein_id=XP_016486753.1] [location=complement(join(9867..11114,11544..11783))] [gbkey=CDS]
Sequence

ATGCTATTGAATCGCCGTGTATTCCGATTCCTGACCGGAATTTCATGTCGATTTTACCAT
TCGGACAAGAGGAAAAAGGTGACACTTTACTCAAAAATCAGTCCACTGGGAGACCCTAAC
TATAGCGTAACAAATGAACTGGACGAATGGGTTTGCAAGGGCAAAAAGGTCCGATTTGCA
GAGCTTCAACGCATTATTCTTGATCTTCGTAAACGCAAACGCTTTAATCAGGCCCTCGAG
GCTTCGGAGTGGATGAAGAGTTCTGGTATTTTCACTTTTTCATCAACCGAGCATGCAGTA
CAGCTGGATCTGATTGGTAAGGTGCACGGGTTTCATGCTGCAGAAAGCTACTTTAATAAC
TTGAATGAAGAAGATAAGAATGATAAGACATATGGTGCTCTTCTTCATTGTTATGTTCGG
CAAGGTGACATTAAAAAGGCATTGACACATTTGAAGATGATGCAGGAGAAGGGTCTTTCT
CTATCTTCTGTGGCCTTCAATGATATAATGTCATTGTACACAAGAACCGGTGAGTATGAA
AAGATACCTGACGTGCTACGCCATATGAAGGAAATTGGGGTTCGTCCTGACAATTTAAGT
TACAGAATCTGTATCAATTCGTATGGAGCAAGATCAGATATTGAGGGGATGGAGAGGGTC
TTAAATGAAATGGAGAACCAATCATACATTGTCATGGACTGGAACACCTATGCTGCTGTT
GCGAACATATATGTTAAATCAGGCCTAAACGATAAAGCAAACAGTTTCCTCAAGAAAGCA
GAAGAGAAGATAGATAATAAAGAAGGGCTCGGGTATAATTACCTCATCTCTGTATATTCT
AGACTGGGAAACAGAGATGAAGTCATCAGATTATGGTTTCTAGAGAAGAGTGCTCTGAAG
AGGTGCATAAATAGGGATTACATAAATATGTTAGAAGCTCTGGTGAGACTTGATGCGCTT
GAAGAAGCGGAGCAGTTGCTCAAGGAGTGGGAAACATCCGATAACTGTTATGATATCCGT
GTGCCATACATAGTCATTATAGGGTATATCGATAAAAAGCTTTATGAAAAGGCCGAGACC
ATGCTTGAAGATTTATCTACAAAAGGGAAGACACTAACACCAAATATTTGGGGAAGACTG
GCAGCAGGCTACCTAGATAAAGGTAAGTTTGAGAGTGCTGTGAAATGCATTAAAGTTGCT
CTTTCCTTAAAGAAGGATAGTAAAGGATGGAAACCTGATCCTAAAGTCATCATGAAAATA
TTAAGTTTGTTGGGGGAGAATGGTAGTGTGGATGATGCTGAATCATTTTTGAGTTCGCTG
AGGCCCGTCGTCTCTGTAAATAGAGAGATGTATCATGTCTTACTAAAATCATATATAGCA
GGTGGTAAAGAAGTTGAAAGACTTCTAAACAGTATGAGAGCTGATAACATTGATGAAAAT
GAAGAAACAAAAGTGATACTTGAAGAATATAAACCAATAAGCTCCTAA

Peptide Sequence

PEP ID

XP_016486753.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial-like [Nicotiana tabacum]
Sequence

MLLNRRVFRFLTGISCRFYHSDKRKKVTLYSKISPLGDPNYSVTNELDEWVCKGKKVRFA
ELQRIILDLRKRKRFNQALEASEWMKSSGIFTFSSTEHAVQLDLIGKVHGFHAAESYFNN
LNEEDKNDKTYGALLHCYVRQGDIKKALTHLKMMQEKGLSLSSVAFNDIMSLYTRTGEYE
KIPDVLRHMKEIGVRPDNLSYRICINSYGARSDIEGMERVLNEMENQSYIVMDWNTYAAV
ANIYVKSGLNDKANSFLKKAEEKIDNKEGLGYNYLISVYSRLGNRDEVIRLWFLEKSALK
RCINRDYINMLEALVRLDALEEAEQLLKEWETSDNCYDIRVPYIVIIGYIDKKLYEKAET
MLEDLSTKGKTLTPNIWGRLAAGYLDKGKFESAVKCIKVALSLKKDSKGWKPDPKVIMKI
LSLLGENGSVDDAESFLSSLRPVVSVNREMYHVLLKSYIAGGKEVERLLNSMRADNIDEN
EETKVILEEYKPISS

Transcript Sequence

Gene sequence data has not been registered.